Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Tspan6O70401 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Tspan6O70401 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tspan6O70401 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tspan6O70401 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Tspan6O70401 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tspan6O70401 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tspan6O70401 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Tspan6O70401 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Tspan6O70401 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tspan6O70401 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.9□□□□□ -0.5
Tspan6O70401 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Tspan6O70401 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.9□□□□□ -0.5
Tspan6O70401 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.9□□□□□ -0.5
Tspan6O70401 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.9□□□□□ -0.5
Tspan6O70401 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.9□□□□□ -0.5
Tspan6O70401 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.9□□□□□ -0.5
Tspan6O70401 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tspan6O70401 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm10288-201ENSMUST00000084614 537 ntBASIC11.9□□□□□ -0.5
Tspan6O70401 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tspan6O70401 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tspan6O70401 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.9□□□□□ -0.5
Tspan6O70401 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tspan6O70401 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Tspan6O70401 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tspan6O70401 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tspan6O70401 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tspan6O70401 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tspan6O70401 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tspan6O70401 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.89□□□□□ -0.51
Tspan6O70401 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Gm8566-201ENSMUST00000120174 465 ntBASIC11.89□□□□□ -0.51
Tspan6O70401 Gm7467-201ENSMUST00000185173 652 ntBASIC11.89□□□□□ -0.51
Tspan6O70401 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.89□□□□□ -0.51
Tspan6O70401 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.89□□□□□ -0.51
Tspan6O70401 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.89□□□□□ -0.51
Tspan6O70401 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tspan6O70401 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Gm5705-201ENSMUST00000066241 711 ntBASIC11.89□□□□□ -0.51
Tspan6O70401 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.89□□□□□ -0.51
Tspan6O70401 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tspan6O70401 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tspan6O70401 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms