Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.4□□□□□ -0.26
Trdmt1O55055 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm5706-201ENSMUST00000181525 993 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm29499-201ENSMUST00000189151 486 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm28329-201ENSMUST00000191208 689 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm29171-201ENSMUST00000191397 486 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm37299-201ENSMUST00000193951 826 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.4□□□□□ -0.26
Trdmt1O55055 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.4□□□□□ -0.26
Trdmt1O55055 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.4□□□□□ -0.26
Trdmt1O55055 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trdmt1O55055 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdmt1O55055 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trdmt1O55055 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trdmt1O55055 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Trdmt1O55055 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.39□□□□□ -0.27
Trdmt1O55055 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm38210-201ENSMUST00000191944 809 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm34023-201ENSMUST00000195539 217 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm43186-201ENSMUST00000198130 824 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.39□□□□□ -0.27
Trdmt1O55055 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trdmt1O55055 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.39□□□□□ -0.27
Trdmt1O55055 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdmt1O55055 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.38□□□□□ -0.27
Trdmt1O55055 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trdmt1O55055 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trdmt1O55055 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms