Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Gm25732-201ENSMUST00000175168 60 ntBASIC12.39□□□□□ -0.43
Limk2O54785 Gm18711-201ENSMUST00000199341 750 ntBASIC12.39□□□□□ -0.43
Limk2O54785 Gm8959-201ENSMUST00000213150 571 ntBASIC12.39□□□□□ -0.43
Limk2O54785 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.39□□□□□ -0.43
Limk2O54785 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.39□□□□□ -0.43
Limk2O54785 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Limk2O54785 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.39□□□□□ -0.43
Limk2O54785 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Limk2O54785 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.38□□□□□ -0.43
Limk2O54785 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.38□□□□□ -0.43
Limk2O54785 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Gm12015-201ENSMUST00000117065 843 ntBASIC12.38□□□□□ -0.43
Limk2O54785 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.38□□□□□ -0.43
Limk2O54785 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Gm24514-201ENSMUST00000174961 285 ntBASIC12.38□□□□□ -0.43
Limk2O54785 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.38□□□□□ -0.43
Limk2O54785 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.38□□□□□ -0.43
Limk2O54785 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Limk2O54785 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Limk2O54785 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Limk2O54785 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.37□□□□□ -0.43
Limk2O54785 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.37□□□□□ -0.43
Limk2O54785 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.37□□□□□ -0.43
Limk2O54785 Gm11331-201ENSMUST00000119764 288 ntBASIC12.37□□□□□ -0.43
Limk2O54785 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.37□□□□□ -0.43
Limk2O54785 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Limk2O54785 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Limk2O54785 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Limk2O54785 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Limk2O54785 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Limk2O54785 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.36□□□□□ -0.43
Limk2O54785 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Limk2O54785 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms