Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.69□□□□□ -0.22
Stx1aO35526 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Stx1aO35526 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.69□□□□□ -0.22
Stx1aO35526 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stx1aO35526 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stx1aO35526 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Stx1aO35526 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Stx1aO35526 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Stx1aO35526 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.68□□□□□ -0.22
Stx1aO35526 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Stx1aO35526 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.68□□□□□ -0.22
Stx1aO35526 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.68□□□□□ -0.22
Stx1aO35526 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.68□□□□□ -0.22
Stx1aO35526 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.68□□□□□ -0.22
Stx1aO35526 Gm44405-201ENSMUST00000198952 126 ntBASIC13.68□□□□□ -0.22
Stx1aO35526 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.68□□□□□ -0.22
Stx1aO35526 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.68□□□□□ -0.22
Stx1aO35526 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stx1aO35526 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.67□□□□□ -0.22
Stx1aO35526 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm14928-201ENSMUST00000120198 477 ntBASIC13.67□□□□□ -0.22
Stx1aO35526 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm27486-201ENSMUST00000184923 80 ntBASIC13.67□□□□□ -0.22
Stx1aO35526 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Stx1aO35526 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.67□□□□□ -0.22
Stx1aO35526 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.67□□□□□ -0.22
Stx1aO35526 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Stx1aO35526 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stx1aO35526 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Stx1aO35526 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Stx1aO35526 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms