Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.64□□□□□ -0.87
Efnb3O35393 Gm8213-201ENSMUST00000118191 441 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 Gm11814-201ENSMUST00000119515 929 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 Gm2231-201ENSMUST00000125661 612 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Efnb3O35393 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.64□□□□□ -0.87
Efnb3O35393 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Gm27486-201ENSMUST00000184923 80 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Efnb3O35393 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.63□□□□□ -0.87
Efnb3O35393 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Efnb3O35393 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Efnb3O35393 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Efnb3O35393 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Gm9022-201ENSMUST00000182482 992 ntBASIC9.63□□□□□ -0.87
Efnb3O35393 Gm27331-201ENSMUST00000183705 60 ntBASIC9.63□□□□□ -0.87
Efnb3O35393 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.63□□□□□ -0.87
Efnb3O35393 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Gm24526-201ENSMUST00000082921 158 ntBASIC9.63□□□□□ -0.87
Efnb3O35393 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.63□□□□□ -0.87
Efnb3O35393 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.63□□□□□ -0.87
Efnb3O35393 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Efnb3O35393 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Efnb3O35393 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Efnb3O35393 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Efnb3O35393 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.62□□□□□ -0.87
Efnb3O35393 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Efnb3O35393 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Efnb3O35393 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Efnb3O35393 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Efnb3O35393 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Efnb3O35393 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Efnb3O35393 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Efnb3O35393 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.62□□□□□ -0.87
Efnb3O35393 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Efnb3O35393 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.62□□□□□ -0.87
Efnb3O35393 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms