Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.82□□□□□ -0.68
Raet1aO08602 Gm26956-201ENSMUST00000182176 986 ntBASIC10.82□□□□□ -0.68
Raet1aO08602 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.82□□□□□ -0.68
Raet1aO08602 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.82□□□□□ -0.68
Raet1aO08602 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.82□□□□□ -0.68
Raet1aO08602 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.82□□□□□ -0.68
Raet1aO08602 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Raet1aO08602 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.82□□□□□ -0.68
Raet1aO08602 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.82□□□□□ -0.68
Raet1aO08602 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.82□□□□□ -0.68
Raet1aO08602 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Raet1aO08602 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Raet1aO08602 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.82□□□□□ -0.68
Raet1aO08602 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.81□□□□□ -0.68
Raet1aO08602 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.81□□□□□ -0.68
Raet1aO08602 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Raet1aO08602 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm23912-201ENSMUST00000104687 87 ntBASIC10.81□□□□□ -0.68
Raet1aO08602 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.81□□□□□ -0.68
Raet1aO08602 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.81□□□□□ -0.68
Raet1aO08602 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm27501-201ENSMUST00000183599 107 ntBASIC10.81□□□□□ -0.68
Raet1aO08602 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm42693-201ENSMUST00000196779 631 ntBASIC10.81□□□□□ -0.68
Raet1aO08602 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.81□□□□□ -0.68
Raet1aO08602 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.81□□□□□ -0.68
Raet1aO08602 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Raet1aO08602 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Raet1aO08602 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Raet1aO08602 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.81□□□□□ -0.68
Raet1aO08602 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raet1aO08602 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Raet1aO08602 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.8□□□□□ -0.68
Raet1aO08602 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Raet1aO08602 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raet1aO08602 Map1b-203ENSMUST00000223725 2669 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms