Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Gm13019-201ENSMUST00000120000 276 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Gm12196-201ENSMUST00000120954 262 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.44□□□□□ -0.42
AlyrefO08583 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.44□□□□□ -0.42
AlyrefO08583 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.44□□□□□ -0.42
AlyrefO08583 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AlyrefO08583 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
AlyrefO08583 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AlyrefO08583 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm26013-201ENSMUST00000104404 119 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Gm25063-201ENSMUST00000104666 94 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm13809-201ENSMUST00000117921 597 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm22144-201ENSMUST00000157402 102 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.43□□□□□ -0.42
AlyrefO08583 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Gm43854-201ENSMUST00000200418 394 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
AlyrefO08583 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.43□□□□□ -0.42
AlyrefO08583 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.43□□□□□ -0.42
AlyrefO08583 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AlyrefO08583 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AlyrefO08583 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.42□□□□□ -0.42
AlyrefO08583 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AlyrefO08583 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.42□□□□□ -0.42
AlyrefO08583 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AlyrefO08583 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AlyrefO08583 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AlyrefO08583 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms