Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm26286-201ENSMUST00000104166 134 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm11509-201ENSMUST00000117358 325 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm13549-201ENSMUST00000118339 796 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm13937-201ENSMUST00000121000 988 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm21092-201ENSMUST00000178995 955 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm17877-201ENSMUST00000192578 814 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.7□□□□□ -0.06
NpcdF8VQB8 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm26013-201ENSMUST00000104404 119 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm13263-201ENSMUST00000121271 838 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Mir8115-201ENSMUST00000184992 119 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm43186-201ENSMUST00000198130 824 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.69□□□□□ -0.06
NpcdF8VQB8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NpcdF8VQB8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.68□□□□□ -0.06
NpcdF8VQB8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.68□□□□□ -0.06
NpcdF8VQB8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gm11511-201ENSMUST00000118146 540 ntBASIC14.68□□□□□ -0.06
NpcdF8VQB8 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.68□□□□□ -0.06
NpcdF8VQB8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gm42657-201ENSMUST00000201746 211 ntBASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.68□□□□□ -0.06
NpcdF8VQB8 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.68□□□□□ -0.06
NpcdF8VQB8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NpcdF8VQB8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NpcdF8VQB8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NpcdF8VQB8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms