Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm11930-201ENSMUST00000117788 190 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm13736-201ENSMUST00000119272 253 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Gm3543D3Z235 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm17376-201ENSMUST00000166016 84 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm27390-201ENSMUST00000184516 176 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm38241-201ENSMUST00000192641 898 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.08□□□□□ -0.64
Gm3543D3Z235 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm3543D3Z235 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Gm3543D3Z235 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm3543D3Z235 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm3543D3Z235 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm3543D3Z235 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm3543D3Z235 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm3543D3Z235 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm3543D3Z235 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms