Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Mir7684-201ENSMUST00000183858 60 ntBASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm27702-201ENSMUST00000184512 56 ntBASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm12887B1AVM1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Snord83b-201ENSMUST00000104546 94 ntBASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gm12151-201ENSMUST00000121374 290 ntBASIC9.82□□□□□ -0.84
Gm12887B1AVM1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gm6736-201ENSMUST00000166583 948 ntBASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms