Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gm12058-201ENSMUST00000118614 437 ntBASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gm14999-201ENSMUST00000121039 624 ntBASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gm27023-201ENSMUST00000182372 285 ntBASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc112A0AUP1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gm23912-201ENSMUST00000104687 87 ntBASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gm12036-201ENSMUST00000120008 530 ntBASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gm13570-201ENSMUST00000140763 309 ntBASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gm17150-201ENSMUST00000165577 381 ntBASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc112A0AUP1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc112A0AUP1 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms