Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm11663-201ENSMUST00000117888 290 ntBASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gm3854A0A1B0GSS6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm8365-201ENSMUST00000197334 648 ntBASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm19287-201ENSMUST00000203190 358 ntBASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm45219-201ENSMUST00000205602 465 ntBASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm9797-202ENSMUST00000218003 294 ntBASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3854A0A1B0GSS6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm12164-201ENSMUST00000121695 551 ntBASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Gm4726-201ENSMUST00000135604 736 ntBASIC12.18□□□□□ -0.46
Gm3854A0A1B0GSS6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms