Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc194A0A140LIT1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc194A0A140LIT1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc194A0A140LIT1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc194A0A140LIT1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc194A0A140LIT1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Gm27731-201ENSMUST00000185192 107 ntBASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Gm6266-201ENSMUST00000203844 806 ntBASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc194A0A140LIT1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Gm24548-201ENSMUST00000158650 108 ntBASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Gm37201-201ENSMUST00000191845 523 ntBASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc194A0A140LIT1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms