Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Trav18A0A075B656 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav18A0A075B656 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav18A0A075B656 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.99□□□□□ -0.81
Trav18A0A075B656 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.99□□□□□ -0.81
Trav18A0A075B656 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav18A0A075B656 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.98□□□□□ -0.81
Trav18A0A075B656 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm13342-201ENSMUST00000121055 207 ntBASIC9.98□□□□□ -0.81
Trav18A0A075B656 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.98□□□□□ -0.81
Trav18A0A075B656 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm5781-201ENSMUST00000219792 443 ntBASIC9.98□□□□□ -0.81
Trav18A0A075B656 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm10076-201ENSMUST00000073238 384 ntBASIC9.98□□□□□ -0.81
Trav18A0A075B656 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav18A0A075B656 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms