Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm12384-201ENSMUST00000119228 919 ntBASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav5-4A0A075B652 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm11964-201ENSMUST00000120982 444 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm17150-201ENSMUST00000165577 381 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm9022-201ENSMUST00000182482 992 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm18584-201ENSMUST00000203098 964 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm22058-201ENSMUST00000083393 310 ntBASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5-4A0A075B652 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms