Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf13bQ9WU72 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm7851-201ENSMUST00000117574 323 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm11331-201ENSMUST00000119764 288 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm11941-201ENSMUST00000119904 610 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm8566-201ENSMUST00000120174 465 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm23699-201ENSMUST00000158835 135 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm20426-201ENSMUST00000173657 440 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm43378-201ENSMUST00000199336 582 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf13bQ9WU72 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Gm11660-201ENSMUST00000120955 412 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Gm9555-201ENSMUST00000200908 583 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Spcs1-203ENSMUST00000226374 592 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.15□□□□□ -0.3
Tnfsf13bQ9WU72 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tnfsf13bQ9WU72 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tnfsf13bQ9WU72 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tnfsf13bQ9WU72 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.14□□□□□ -0.31
Tnfsf13bQ9WU72 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfsf13bQ9WU72 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms