Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gm27910-201ENSMUST00000185004 107 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gm11340-201ENSMUST00000119226 412 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Mir6998-201ENSMUST00000183343 64 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cacna1fQ9JIS7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Gm20495-201ENSMUST00000173902 235 ntBASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1fQ9JIS7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Gm8459-201ENSMUST00000162504 760 ntBASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.67□□□□□ -0.22
Cacna1fQ9JIS7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms