Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm15074-201ENSMUST00000117603 936 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm29127-201ENSMUST00000188304 517 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm9723-201ENSMUST00000192100 457 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm7029-201ENSMUST00000173226 450 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm8502-201ENSMUST00000185708 901 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm21147-201ENSMUST00000186046 913 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm8510-201ENSMUST00000189202 895 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm2316-201ENSMUST00000190613 921 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm19163-201ENSMUST00000223313 780 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim39Q9ESN2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim39Q9ESN2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms