Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm18187-201ENSMUST00000196476 984 ntBASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc130Q9D516 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm15824-201ENSMUST00000119516 955 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm13829-201ENSMUST00000119600 138 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm27731-201ENSMUST00000185192 107 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc130Q9D516 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc130Q9D516 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms