Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Gm26286-201ENSMUST00000104166 134 ntBASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Gm1821-202ENSMUST00000227415 750 ntBASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Stag1Q9D3E6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Gm7467-201ENSMUST00000185173 652 ntBASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Gm37835-201ENSMUST00000193305 361 ntBASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Gm45770-201ENSMUST00000212105 616 ntBASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stag1Q9D3E6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm11509-201ENSMUST00000117358 325 ntBASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm12857-201ENSMUST00000117678 592 ntBASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.54□□□□□ -0.08
Stag1Q9D3E6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stag1Q9D3E6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms