Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm15487-201ENSMUST00000122373 465 ntBASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Mir8102-201ENSMUST00000184148 139 ntBASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Gm45878-201ENSMUST00000211839 241 ntBASIC12.26□□□□□ -0.45
Trim42Q9D2H5 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim42Q9D2H5 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gm22189-201ENSMUST00000103822 86 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gm7730-201ENSMUST00000212486 454 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Gm18473-201ENSMUST00000220543 868 ntBASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim42Q9D2H5 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms