Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Mir6956-201ENSMUST00000183598 62 ntBASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Tmem88Q9D0N8 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Spata33-207ENSMUST00000212760 4074 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Gm15393-201ENSMUST00000120499 219 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Gm27618-201ENSMUST00000183671 60 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Tmem88Q9D0N8 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tmem88Q9D0N8 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms