Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shmt2Q9CZN7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm14760-201ENSMUST00000121831 999 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm16296-201ENSMUST00000159905 325 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm42599-201ENSMUST00000201308 469 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm7399-201ENSMUST00000032395 858 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shmt2Q9CZN7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Mospd4-201ENSMUST00000180618 576 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm45930-201ENSMUST00000221330 292 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Gm9823-201ENSMUST00000051212 327 ntBASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shmt2Q9CZN7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 120.9 ms