Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssr1Q9CY50 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssr1Q9CY50 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Gm44124-201ENSMUST00000204159 472 ntBASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssr1Q9CY50 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm17244-201ENSMUST00000192482 3416 ntBASIC13.31□□□□□ -0.28
Ssr1Q9CY50 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm7561-201ENSMUST00000211203 886 ntBASIC13.31□□□□□ -0.28
Ssr1Q9CY50 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm32025-201ENSMUST00000217960 307 ntBASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ssr1Q9CY50 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssr1Q9CY50 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms