Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.55□□□□□ -0.56
Use1Q9CQ56 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.55□□□□□ -0.56
Use1Q9CQ56 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm9083-201ENSMUST00000120423 819 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm27682-201ENSMUST00000183930 110 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm44958-201ENSMUST00000203734 736 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.54□□□□□ -0.56
Use1Q9CQ56 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.54□□□□□ -0.56
Use1Q9CQ56 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.53□□□□□ -0.56
Use1Q9CQ56 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Gm16177-201ENSMUST00000120728 718 ntBASIC11.53□□□□□ -0.56
Use1Q9CQ56 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Gm23119-201ENSMUST00000158610 140 ntBASIC11.53□□□□□ -0.56
Use1Q9CQ56 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.53□□□□□ -0.56
Use1Q9CQ56 Gm18304-201ENSMUST00000189162 546 ntBASIC11.53□□□□□ -0.56
Use1Q9CQ56 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Use1Q9CQ56 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms