Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac9Q99N13 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.36□□□□□ -0.11
Hdac9Q99N13 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.36□□□□□ -0.11
Hdac9Q99N13 Gm12164-201ENSMUST00000121695 551 ntBASIC14.36□□□□□ -0.11
Hdac9Q99N13 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.36□□□□□ -0.11
Hdac9Q99N13 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac9Q99N13 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Gm8815-201ENSMUST00000173809 620 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 Mir6958-201ENSMUST00000184207 73 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.35□□□□□ -0.11
Hdac9Q99N13 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 Snora73b-201ENSMUST00000083419 205 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.35□□□□□ -0.11
Hdac9Q99N13 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac9Q99N13 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Gm15595-201ENSMUST00000120840 961 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Gm15566-201ENSMUST00000121130 590 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Gm8737-201ENSMUST00000122208 642 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Gm29155-201ENSMUST00000185910 269 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Gm28324-201ENSMUST00000187913 264 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Gm38210-201ENSMUST00000191944 809 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.34□□□□□ -0.11
Hdac9Q99N13 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac9Q99N13 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms