Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm11509-201ENSMUST00000117358 325 ntBASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm1848-201ENSMUST00000120711 789 ntBASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-1Q99MA9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm12899-201ENSMUST00000120565 551 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm6485-201ENSMUST00000160676 439 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm8343-201ENSMUST00000182705 994 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm42518-201ENSMUST00000196277 938 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-1Q99MA9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms