Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm12029-201ENSMUST00000120073 832 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm11450-201ENSMUST00000121144 333 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm8194-201ENSMUST00000159783 859 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm9540-201ENSMUST00000188230 478 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.75□□□□□ -0.69
Scrt1Q99M85 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm23949-201ENSMUST00000104027 127 ntBASIC10.74□□□□□ -0.69
Scrt1Q99M85 Mir874-201ENSMUST00000104769 76 ntBASIC10.74□□□□□ -0.69
Scrt1Q99M85 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm13045-201ENSMUST00000119019 712 ntBASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm45219-201ENSMUST00000205602 465 ntBASIC10.74□□□□□ -0.69
Scrt1Q99M85 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.74□□□□□ -0.69
Scrt1Q99M85 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scrt1Q99M85 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
Scrt1Q99M85 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms