Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Gm12176-201ENSMUST00000121420 875 ntBASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Gm27627-201ENSMUST00000183644 150 ntBASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Gm37666-201ENSMUST00000194110 866 ntBASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Gm18730-201ENSMUST00000218038 343 ntBASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcc1Q99LI2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Gm22902-201ENSMUST00000158488 302 ntBASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Gm9230-201ENSMUST00000188228 532 ntBASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcc1Q99LI2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Gm24934-201ENSMUST00000103764 111 ntBASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Gm11989-201ENSMUST00000117240 672 ntBASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Gm11362-201ENSMUST00000118838 850 ntBASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Gm44958-201ENSMUST00000203734 736 ntBASIC12.07□□□□□ -0.48
Clcc1Q99LI2 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcc1Q99LI2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms