Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.03■□□□□ -0
RtcbQ99LF4 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.03■□□□□ -0
RtcbQ99LF4 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.03■□□□□ -0
RtcbQ99LF4 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC15.03■□□□□ -0
RtcbQ99LF4 Gm24398-201ENSMUST00000157870 109 ntBASIC15.03■□□□□ -0
RtcbQ99LF4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.03■□□□□ -0
RtcbQ99LF4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.03■□□□□ -0
RtcbQ99LF4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.03■□□□□ -0
RtcbQ99LF4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.03■□□□□ -0
RtcbQ99LF4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Gm2553-201ENSMUST00000215986 605 ntBASIC15.03■□□□□ -0
RtcbQ99LF4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.03■□□□□ -0
RtcbQ99LF4 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.03■□□□□ -0
RtcbQ99LF4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RtcbQ99LF4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RtcbQ99LF4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.02■□□□□ -0
RtcbQ99LF4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.02■□□□□ -0
RtcbQ99LF4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.02■□□□□ -0
RtcbQ99LF4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RtcbQ99LF4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
RtcbQ99LF4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.02■□□□□ -0
RtcbQ99LF4 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.02■□□□□ -0
RtcbQ99LF4 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.02■□□□□ -0
RtcbQ99LF4 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Gm5100-201ENSMUST00000195631 589 ntBASIC15.02■□□□□ -0
RtcbQ99LF4 Gm43852-201ENSMUST00000202098 917 ntBASIC15.02■□□□□ -0
RtcbQ99LF4 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.02■□□□□ -0
RtcbQ99LF4 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 CT009536.2-201ENSMUST00000225370 665 ntBASIC15.02■□□□□ -0
RtcbQ99LF4 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RtcbQ99LF4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
RtcbQ99LF4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RtcbQ99LF4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RtcbQ99LF4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RtcbQ99LF4 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.02□□□□□ -0.01
RtcbQ99LF4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RtcbQ99LF4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.02□□□□□ -0.01
RtcbQ99LF4 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.01□□□□□ -0.01
RtcbQ99LF4 Gm12407-201ENSMUST00000180219 324 ntBASIC15.01□□□□□ -0.01
RtcbQ99LF4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.01□□□□□ -0.01
RtcbQ99LF4 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.01□□□□□ -0.01
RtcbQ99LF4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RtcbQ99LF4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RtcbQ99LF4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RtcbQ99LF4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RtcbQ99LF4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC15□□□□□ -0.01
RtcbQ99LF4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms