Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm14263-201ENSMUST00000117955 746 ntBASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm13045-201ENSMUST00000119019 712 ntBASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm8100-201ENSMUST00000182906 988 ntBASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Gm9555-201ENSMUST00000200908 583 ntBASIC14.4□□□□□ -0.1
Col20a1Q923P0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.4□□□□□ -0.1
Col20a1Q923P0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col20a1Q923P0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.39□□□□□ -0.11
Col20a1Q923P0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.39□□□□□ -0.11
Col20a1Q923P0 Gm23251-201ENSMUST00000103773 110 ntBASIC14.39□□□□□ -0.11
Col20a1Q923P0 Gm24891-201ENSMUST00000104391 136 ntBASIC14.39□□□□□ -0.11
Col20a1Q923P0 Gm8566-201ENSMUST00000120174 465 ntBASIC14.39□□□□□ -0.11
Col20a1Q923P0 Gm18893-201ENSMUST00000198416 943 ntBASIC14.39□□□□□ -0.11
Col20a1Q923P0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.39□□□□□ -0.11
Col20a1Q923P0 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.39□□□□□ -0.11
Col20a1Q923P0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col20a1Q923P0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.38□□□□□ -0.11
Col20a1Q923P0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.38□□□□□ -0.11
Col20a1Q923P0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.38□□□□□ -0.11
Col20a1Q923P0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm13611-201ENSMUST00000118269 318 ntBASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm11660-201ENSMUST00000120955 412 ntBASIC14.38□□□□□ -0.11
Col20a1Q923P0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm19353-201ENSMUST00000184561 445 ntBASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col20a1Q923P0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col20a1Q923P0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Col20a1Q923P0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Col20a1Q923P0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col20a1Q923P0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col20a1Q923P0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.37□□□□□ -0.11
Col20a1Q923P0 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.37□□□□□ -0.11
Col20a1Q923P0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col20a1Q923P0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms