Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha8Q91Y12 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gm9083-201ENSMUST00000120423 819 ntBASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gm14999-201ENSMUST00000121039 624 ntBASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gm44958-201ENSMUST00000203734 736 ntBASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gm10478-201ENSMUST00000084451 396 ntBASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha8Q91Y12 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm13392-201ENSMUST00000117708 150 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm13875-201ENSMUST00000120162 282 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm13786-201ENSMUST00000122371 333 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm2546-201ENSMUST00000182630 991 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm6013-201ENSMUST00000212264 699 ntBASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pcdha8Q91Y12 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms