Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb18Q91Y02 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb18Q91Y02 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.81□□□□□ -0.36
Pcdhb18Q91Y02 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.81□□□□□ -0.36
Pcdhb18Q91Y02 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb18Q91Y02 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb18Q91Y02 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb18Q91Y02 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Gm22133-201ENSMUST00000102082 109 ntBASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Gm18038-201ENSMUST00000197900 485 ntBASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb18Q91Y02 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Gm19994-201ENSMUST00000217086 586 ntBASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb18Q91Y02 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb18Q91Y02 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms