Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm13888-201ENSMUST00000119148 422 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm11660-201ENSMUST00000120955 412 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm15881-201ENSMUST00000148792 942 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm27438-201ENSMUST00000183480 110 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm18893-201ENSMUST00000198416 943 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm8285-201ENSMUST00000208293 759 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb5Q91XZ5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm15573-201ENSMUST00000119487 540 ntBASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm12208-201ENSMUST00000122004 163 ntBASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.35□□□□□ -0.11
Pcdhb5Q91XZ5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb5Q91XZ5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms