Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm25214-201ENSMUST00000104573 129 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12616-201ENSMUST00000118594 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm13875-201ENSMUST00000120162 282 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm20426-201ENSMUST00000173657 440 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12624-201ENSMUST00000177615 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12621-201ENSMUST00000177760 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12615-201ENSMUST00000177970 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12622-201ENSMUST00000177975 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12627-201ENSMUST00000178412 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12625-201ENSMUST00000179122 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12614-201ENSMUST00000179586 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm12613-201ENSMUST00000180323 382 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdt1Q8R4E9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Mir1943-201ENSMUST00000158276 73 ntBASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Gm3508-201ENSMUST00000186012 792 ntBASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdt1Q8R4E9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.86□□□□□ -0.51
Cdt1Q8R4E9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms