Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfc3Q8R323 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfc3Q8R323 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.35□□□□□ -0.59
Rfc3Q8R323 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Gm16570-201ENSMUST00000161951 436 ntBASIC11.35□□□□□ -0.59
Rfc3Q8R323 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 AA914427-201ENSMUST00000193194 1166 ntBASIC11.35□□□□□ -0.59
Rfc3Q8R323 Gm38317-201ENSMUST00000195564 343 ntBASIC11.35□□□□□ -0.59
Rfc3Q8R323 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.35□□□□□ -0.59
Rfc3Q8R323 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rfc3Q8R323 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.34□□□□□ -0.59
Rfc3Q8R323 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm13315-201ENSMUST00000120376 991 ntBASIC11.34□□□□□ -0.59
Rfc3Q8R323 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.34□□□□□ -0.59
Rfc3Q8R323 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm44262-201ENSMUST00000204969 372 ntBASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm5363-201ENSMUST00000211927 938 ntBASIC11.34□□□□□ -0.59
Rfc3Q8R323 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.34□□□□□ -0.59
Rfc3Q8R323 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.34□□□□□ -0.59
Rfc3Q8R323 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfc3Q8R323 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.33□□□□□ -0.59
Rfc3Q8R323 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rfc3Q8R323 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfc3Q8R323 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfc3Q8R323 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfc3Q8R323 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms