Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Gm11660-201ENSMUST00000120955 412 ntBASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp7Q8R1T1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp7Q8R1T1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp7Q8R1T1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Chmp7Q8R1T1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp7Q8R1T1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Gm13263-201ENSMUST00000121271 838 ntBASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Gm45550-201ENSMUST00000209380 946 ntBASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Gm45575-201ENSMUST00000210283 548 ntBASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Chmp7Q8R1T1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm22144-201ENSMUST00000157402 102 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm45219-201ENSMUST00000205602 465 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm45398-201ENSMUST00000210561 165 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp7Q8R1T1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms