Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gm14109-201ENSMUST00000118814 309 ntBASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gm14381-201ENSMUST00000122105 414 ntBASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf39Q8K2Z2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf39Q8K2Z2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm24255-201ENSMUST00000104481 128 ntBASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm20482-202ENSMUST00000174729 825 ntBASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm9230-201ENSMUST00000188228 532 ntBASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf39Q8K2Z2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms