Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Gm5370-201ENSMUST00000187187 574 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm13829-201ENSMUST00000119600 138 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm13875-201ENSMUST00000120162 282 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Snora78-201ENSMUST00000158630 128 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm18711-201ENSMUST00000199341 750 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cchcr1Q8K2I2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms