Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.43□□□□□ -0.74
Depp1Q8K2F3 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Snora73a-201ENSMUST00000082453 205 ntBASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Depp1Q8K2F3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm24830-201ENSMUST00000102024 166 ntBASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm11424-201ENSMUST00000121929 829 ntBASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm42937-201ENSMUST00000197360 752 ntBASIC10.42□□□□□ -0.74
Depp1Q8K2F3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm26232-201ENSMUST00000083360 166 ntBASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.42□□□□□ -0.74
Depp1Q8K2F3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Depp1Q8K2F3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Depp1Q8K2F3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Depp1Q8K2F3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Depp1Q8K2F3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms