Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.5□□□□□ -0.41
CopaQ8CIE6 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.5□□□□□ -0.41
CopaQ8CIE6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Mir3102-201ENSMUST00000175555 104 ntBASIC12.5□□□□□ -0.41
CopaQ8CIE6 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.5□□□□□ -0.41
CopaQ8CIE6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.5□□□□□ -0.41
CopaQ8CIE6 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.5□□□□□ -0.41
CopaQ8CIE6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Mir339-201ENSMUST00000083659 96 ntBASIC12.5□□□□□ -0.41
CopaQ8CIE6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CopaQ8CIE6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.49□□□□□ -0.41
CopaQ8CIE6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.49□□□□□ -0.41
CopaQ8CIE6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm14921-201ENSMUST00000118643 908 ntBASIC12.49□□□□□ -0.41
CopaQ8CIE6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm16570-201ENSMUST00000161951 436 ntBASIC12.49□□□□□ -0.41
CopaQ8CIE6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm9630-201ENSMUST00000178304 885 ntBASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.49□□□□□ -0.41
CopaQ8CIE6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopaQ8CIE6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms