Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Mir7677-201ENSMUST00000184226 67 ntBASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rdh1Q8CGV4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Gm15515-201ENSMUST00000117827 822 ntBASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Gm14247-201ENSMUST00000120950 237 ntBASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Gm43184-201ENSMUST00000197247 542 ntBASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Gm270-201ENSMUST00000223010 976 ntBASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rdh1Q8CGV4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Gm3786-201ENSMUST00000202659 378 ntBASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Gm7848-201ENSMUST00000210739 718 ntBASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rdh1Q8CGV4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms