Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Mir8109-201ENSMUST00000184375 117 ntBASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Gm37466-201ENSMUST00000195692 652 ntBASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Mir3547-201ENSMUST00000175461 88 ntBASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gm27516-201ENSMUST00000184237 98 ntBASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gm38002-201ENSMUST00000193255 180 ntBASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gm44364-201ENSMUST00000198368 141 ntBASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gm7783-201ENSMUST00000204795 781 ntBASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vcpip1Q8CDG3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Cog3-203ENSMUST00000227473 4197 ntBASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gm19309-201ENSMUST00000218295 205 ntBASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.12□□□□□ -0.31
Vcpip1Q8CDG3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms