Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Gm16177-201ENSMUST00000120728 718 ntBASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Lrif1Q8CDD9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gm24231-201ENSMUST00000104315 133 ntBASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gm27514-201ENSMUST00000183692 110 ntBASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lrif1Q8CDD9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lrif1Q8CDD9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lrif1Q8CDD9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lrif1Q8CDD9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lrif1Q8CDD9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.06□□□□□ -0.48
Lrif1Q8CDD9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lrif1Q8CDD9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lrif1Q8CDD9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms