Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Gm13665-201ENSMUST00000120830 528 ntBASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Gm13570-201ENSMUST00000140763 309 ntBASIC14.24□□□□□ -0.13
Vps53Q8CCB4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.24□□□□□ -0.13
Vps53Q8CCB4 AA914427-201ENSMUST00000193194 1166 ntBASIC14.24□□□□□ -0.13
Vps53Q8CCB4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps53Q8CCB4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Gm15547-201ENSMUST00000122152 333 ntBASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.23□□□□□ -0.13
Vps53Q8CCB4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms