Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Gm13996-201ENSMUST00000118456 430 ntBASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.25□□□□□ -0.13
Usp44Q8C2S0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp44Q8C2S0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm11511-201ENSMUST00000118146 540 ntBASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp44Q8C2S0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.24□□□□□ -0.13
Usp44Q8C2S0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp44Q8C2S0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms