Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm9630-201ENSMUST00000178304 885 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm22334-201ENSMUST00000158070 133 ntBASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm4157-201ENSMUST00000211647 679 ntBASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh3rf2Q8BZT2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm11511-201ENSMUST00000118146 540 ntBASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm5523-201ENSMUST00000180415 997 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms