Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph4aQ8BYM7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rsph4aQ8BYM7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rsph4aQ8BYM7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Rsph4aQ8BYM7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm22275-201ENSMUST00000122470 310 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm18200-201ENSMUST00000173265 833 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm18190-201ENSMUST00000174801 832 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm9540-201ENSMUST00000188230 478 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm6321-201ENSMUST00000194460 1090 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm43997-201ENSMUST00000203986 1005 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm6905-201ENSMUST00000205729 511 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 AC166992.1-201ENSMUST00000216356 565 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 CT009713.8-202ENSMUST00000224732 385 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 CT009713.8-201ENSMUST00000225448 560 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 CT025618.1-201ENSMUST00000227409 1279 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm24035-201ENSMUST00000082867 107 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC18.2■□□□□ 0.5
Rsph4aQ8BYM7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm17026-201ENSMUST00000166674 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm17124-201ENSMUST00000168320 1379 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Mup-ps14-201ENSMUST00000118437 532 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm12196-201ENSMUST00000120954 262 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm13460-201ENSMUST00000121274 353 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm23777-201ENSMUST00000158994 259 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm22906-201ENSMUST00000175191 250 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm43690-201ENSMUST00000201213 266 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm43962-201ENSMUST00000203898 190 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Gm19170-201ENSMUST00000212440 1084 ntBASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC18.19■□□□□ 0.5
Rsph4aQ8BYM7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph4aQ8BYM7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms