Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd9Q8BYH8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Chd9Q8BYH8 Gm7701-201ENSMUST00000163185 1479 ntBASIC9.51□□□□□ -0.89
Chd9Q8BYH8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd9Q8BYH8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.51□□□□□ -0.89
Chd9Q8BYH8 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.51□□□□□ -0.89
Chd9Q8BYH8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.51□□□□□ -0.89
Chd9Q8BYH8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm5190-201ENSMUST00000192434 357 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 AC174797.2-201ENSMUST00000225835 165 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 AU015228-201ENSMUST00000121103 1320 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm13263-201ENSMUST00000121271 838 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd9Q8BYH8 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm14270-201ENSMUST00000118388 846 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm24231-201ENSMUST00000104315 133 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm11511-201ENSMUST00000118146 540 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm16441-201ENSMUST00000138176 924 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms