Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Gm14760-201ENSMUST00000121831 999 ntBASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Gm5733-201ENSMUST00000190232 939 ntBASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.95□□□□□ -0.34
Rd3Q8BRE0 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.95□□□□□ -0.34
Rd3Q8BRE0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rd3Q8BRE0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm7851-201ENSMUST00000117574 323 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm14665-201ENSMUST00000122294 557 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm28686-201ENSMUST00000187404 609 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm3332-201ENSMUST00000189337 928 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm4607-201ENSMUST00000206649 577 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Gm26035-201ENSMUST00000083065 308 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rd3Q8BRE0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rd3Q8BRE0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms